The detailed information of tRNA gene sequence


Sequence ID>SRA1010035
Genome IDSRR020491.434901
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 6
End posion on genome 79
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnngaaga
tRNA gene sequence 
GGGCTGATAGTTCAGACTGGTAGAATACTCGCCTTGCACGCGAGGGGTCAGGGGTTCAAA
TCCCCTTCAGTCCAtct
Downstream region at tRNA end position 
tttgtttgtt
Secondary structure (Cloverleaf model)
>SRA1010035	Ala	TGC
                   a      Atct tttgtttgtt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     A - T          T A
                    T     T C C C C     A
      A G A        A      | | | | |     A
    C       C T T G       A G G G G     C
    T       | | | +                 T T
    G       G A A T
      G T A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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