The detailed information of tRNA gene sequence


Sequence ID>SRA1010043
Genome IDSRR020491.437781
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 204
End posion on genome 115
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttcttcaag
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAAGCACTGGTCTTGAAAACCAGCAACGGGGAAACTCGT
TCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaagaacttc
Secondary structure (Cloverleaf model)
>SRA1010043	Ser	TGA
                   g      GCCA gaagaacttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAACGGGGAAACTCGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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