The detailed information of tRNA gene sequence


Sequence ID>SRA1010056
Genome IDSRR020491.442864
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 78
End posion on genome 164
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatggatagt
tRNA gene sequence 
GGAGAGGTGCCCGAGCGGCTTAAGGGACACGTCTTGAAAACGTGCGTGGCAAAACCACCG
TGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaatccactc
Secondary structure (Cloverleaf model)
>SRA1010056	Ser	TGA
                   t      GCCA gaatccactc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      T T A        A     CGTGGCAAAACCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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