The detailed information of tRNA gene sequence


Sequence ID>SRA1010067
Genome IDSRR020491.446733
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 27
End posion on genome 117
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tattagtaaT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGGCTCCCTGCTAAGGAGTTACAGGAGGTAACTTC
TGTCGAGGGTTCGAATCCCTCCCTCTCCGTgt
Downstream region at tRNA end position 
tttttaagtt
Secondary structure (Cloverleaf model)
>SRA1010067	Ser	GCT
                   T      GTgt tttttaagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TACAGGAGGTAACTTCTGTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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