The detailed information of tRNA gene sequence


Sequence ID>SRA1010082
Genome IDSRR020491.453258
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 16
End posion on genome 103
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcttcggtac
tRNA gene sequence 
GGAGGGATGACAGAGCGGACGATTGTGACGGTCTTGAAAACCGTTGAGCCTCATGGCTCC
GGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
tccgacccgc
Secondary structure (Cloverleaf model)
>SRA1010082	Ser	TGA
                   c      GCCA tccgacccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C A       G G G G G     C
    G       + | | |                 T T
    A       T T G T
      C G A        G     TGAGCCTCATGGCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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