The detailed information of tRNA gene sequence


Sequence ID>SRA1010088
Genome IDSRR020491.454280
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 217
End posion on genome 140
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcacttgat
tRNA gene sequence 
GGCAGGGTAGCTCAGTTGGTGAGGAGCGCTGGATTCATAACCCAGAGGTCGGCAGTTCAA
ATCTGCCTCCTGCTACCA
Downstream region at tRNA end position 
gtgttaagat
Secondary structure (Cloverleaf model)
>SRA1010088	Met	CAT
                   t      ACCA gtgttaagat
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C C G T C     A
    T T G A        A      | | | | |     A
  G         C T C G       G G C A G     C
  G         | | | |                 T T
  T         G A G C
    G A G          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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