The detailed information of tRNA gene sequence


Sequence ID>SRA1010097
Genome IDSRR020491.456063
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 212
End posion on genome 124
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tacttgtatT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCTGGTCTCGAAAACCAGTATCTGAATTTTCAGA
TCGTGGGTTCGAATCCCACCCTCTCCGTat
Downstream region at tRNA end position 
gaaaattata
Secondary structure (Cloverleaf model)
>SRA1010097	Ser	CGA
                   T      GTat gaaaattata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TATCTGAATTTTCAGATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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