The detailed information of tRNA gene sequence


Sequence ID>SRA1010112
Genome IDSRR020491.461647
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 50
End posion on genome 137
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttgattttc
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGCTTAATGCGGCGGTCTTGAAAACCGTTGACCTGCGAAGGTCC
GGGGGTTCAAATCCCTCCCCCTCCGCAA
Downstream region at tRNA end position 
tttcctattt
Secondary structure (Cloverleaf model)
>SRA1010112	Ser	TGA
                   c      GCAA tttcctattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      T T A        G     TGACCTGCGAAGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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