The detailed information of tRNA gene sequence


Sequence ID>SRA1010122
Genome IDSRR020491.465468
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 177
End posion on genome 253
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgccttttc
tRNA gene sequence 
GGGCCAGTAGCTCAGCCGGTTAGAGCGCAGTCCTGATAAGACTGAGGTCCCTGGTTCGAG
TCCAGGCTGGCCCACCA
Downstream region at tRNA end position 
gaacgnnnnn
Secondary structure (Cloverleaf model)
>SRA1010122	Ile	GAT
                   c      ACCA gaacgnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     G G A C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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