The detailed information of tRNA gene sequence


Sequence ID>SRA1010133
Genome IDSRR020491.468259
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 103
End posion on genome 28
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
taaataattt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCGTGGATGGCATTCACGAGGTCGTCGGTTCGATC
CCGTCCGGCTCCACAA
Downstream region at tRNA end position 
aattattttt
Secondary structure (Cloverleaf model)
>SRA1010133	Ala	GGC
                   t      ACAA aattattttt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    G + T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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