The detailed information of tRNA gene sequence


Sequence ID>SRA1010137
Genome IDSRR020491.469031
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 260
End posion on genome 184
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccnctgcg
tRNA gene sequence 
CGCGGGATGGAGCAGTCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGGCGGTTCAAA
TCCGCCTCCCGCAACCA
Downstream region at tRNA end position 
atttcgcccc
Secondary structure (Cloverleaf model)
>SRA1010137	Met	CAT
                   g      ACCA atttcgcccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C G C C     A
      T G A        G      | | | | |     A
    C       C G A G       G G C G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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