The detailed information of tRNA gene sequence


Sequence ID>SRA1010145
Genome IDSRR020491.472132
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 134
End posion on genome 210
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tttttatgcg
tRNA gene sequence 
GGGTTTGTAGCTCAGTTGGTTAGAGCACCGCTCTGATAAGGCGGGGGTCGGAAGTTCGAA
TCTTCCCAGACCCACAA
Downstream region at tRNA end position 
cgattatatt
Secondary structure (Cloverleaf model)
>SRA1010145	Ile	GAT
                   g      ACAA cgattatatt
                     G - C
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C          T A
                    T     C C T T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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