The detailed information of tRNA gene sequence


Sequence ID>SRA1010146
Genome IDSRR020491.473092
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 135
End posion on genome 212
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
attaaagcaa
tRNA gene sequence 
CGGGACGTGGCGCAGTCTGGTAGCGTACTCGACTGGGGGTCGGAGTGGTCGGAGGTTCAA
ATCCTCTCGTCCCGATCA
Downstream region at tRNA end position 
tttaaattgc
Secondary structure (Cloverleaf model)
>SRA1010146	Pro	GGG
                   a      ATCA tttaaattgc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GTGGTC
                    C   A
                    T + G
                    C - G
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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