The detailed information of tRNA gene sequence


Sequence ID>SRA1010160
Genome IDSRR020491.475469
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 66
End posion on genome 143
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcggcccagc
tRNA gene sequence 
GCTTGTGTGGTGTAGTTCGGTCCATCATGCCGCCCTTTCGAGGCGGCGACCCGGGTTCAA
ATCCCGGCACGAGCACCT
Downstream region at tRNA end position 
tcatcagtcg
Secondary structure (Cloverleaf model)
>SRA1010160	Glu	TTC
                   c      ACCT tcatcagtcg
                     G - C
                     C - G
                     T - A
                     T + G
                     G - C
                     T - A
                     G - C          T A
                    T     G G C C C     A
    T T G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G           | | +                 T T
  G         T C A T
    T C C A        G     CGAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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