The detailed information of tRNA gene sequence


Sequence ID>SRA1010162
Genome IDSRR020491.476045
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 3
End posion on genome 78
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnnnta
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGAGAGGGTCGTAGGTTCGAGT
CCTTCAGTGCCCACCA
Downstream region at tRNA end position 
ttttgggggt
Secondary structure (Cloverleaf model)
>SRA1010162	Val	TAC
                   a      ACCA ttttgggggt
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          T G
                    T     C T T C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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