The detailed information of tRNA gene sequence


Sequence ID>SRA1010171
Genome IDSRR020491.478065
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 185
End posion on genome 271
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttttcatgtT
tRNA gene sequence 
GCGGGGGTCGCCCAGCTTGGTCAACGGCGTAAGGTTCAGATCCTTATCTCCTAGGAGTTC
ATGGGTTCAAATCCCATCTCCCGCATtg
Downstream region at tRNA end position 
ttgctttttt
Secondary structure (Cloverleaf model)
>SRA1010171	Leu	CAG
                   T      ATtg ttgctttttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     T A C C C     A
    T C G A        C      | | | | |     A
  T         C C C G       A T G G G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TCTCCTAGGAGTTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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