The detailed information of tRNA gene sequence


Sequence ID>SRA1010177
Genome IDSRR020491.480377
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 171
End posion on genome 100
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tggatcagat
tRNA gene sequence 
GCCCACGTAGCTCAGTGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCATCGGTTCAATCC
CGATCGTGGGCTtgt
Downstream region at tRNA end position 
ttcaatgtgt
Secondary structure (Cloverleaf model)
>SRA1010177	Thr	GGT
                   t      Ttgt ttcaatgtgt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T A G C C     A
        G A        A      | | | | |     A
      T     C T C G       A T C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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