The detailed information of tRNA gene sequence


Sequence ID>SRA1010182
Genome IDSRR020491.482309
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 159
End posion on genome 232
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcccattatt
tRNA gene sequence 
GGGCCCTTAGCTCAGTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCGGGGTTCGAAT
CCCTGAGGGCCCACac
Downstream region at tRNA end position 
attccccatt
Secondary structure (Cloverleaf model)
>SRA1010182	Met	CAT
                   t      ACac attccccatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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