The detailed information of tRNA gene sequence


Sequence ID>SRA1010193
Genome IDSRR020491.486481
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 91
End posion on genome 168
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattaatttt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTACACTCATAATGTATTGGTCCCTGGTTCGAG
TCCAGGCGGGGCCCACC
Downstream region at tRNA end position 
Attaacatct
Secondary structure (Cloverleaf model)
>SRA1010193	Met	CAT
                   t      CACC Attaacatct
                     G - C
                     G - C
                     G   G
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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