The detailed information of tRNA gene sequence


Sequence ID>SRA1010200
Genome IDSRR020491.488357
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 124
End posion on genome 200
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccatttnt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAGGCCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
tatcttcaca
Secondary structure (Cloverleaf model)
>SRA1010200	Asp	GTC
                   t      GCCA tatcttcaca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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