The detailed information of tRNA gene sequence


Sequence ID>SRA1010209
Genome IDSRR020491.491336
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 269
End posion on genome 194
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ntttttgggT
tRNA gene sequence 
GGGCCTGTAACTCAGCTTGGTAGAGTACCCGACTCATAATCGGGGAGCCACGGGATCGAA
GCCCATCAGGCCCATta
Downstream region at tRNA end position 
ttttcttcta
Secondary structure (Cloverleaf model)
>SRA1010209	Met	CAT
                   T      ATta ttttcttcta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          G A
                    T     T A C C C     A
      C G A        A      |   | | |     G
    T       C T C A       A C G G G     C
    T       | | | |                 A T
    G       G A G T
      G T A        A     GAGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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