The detailed information of tRNA gene sequence


Sequence ID>SRA1010216
Genome IDSRR020491.492521
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 23
End posion on genome 99
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gaaacagcac
tRNA gene sequence 
GGCGCATTCGTCTAGTGGCCCAGGACACCGCCCTCTCAAGGCGGAGATCGGGGGTTCGAA
TCCCCCATGCGCTACCA
Downstream region at tRNA end position 
gaaaaccacg
Secondary structure (Cloverleaf model)
>SRA1010216	Glu	CTC
                   c      ACCA gaaaaccacg
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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