The detailed information of tRNA gene sequence


Sequence ID>SRA1010219
Genome IDSRR020491.492883
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 145
End posion on genome 70
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cacataattt
tRNA gene sequence 
AGGAGTGTAGCTCAGTTGGAAGAGCACCGGTCTCCAAAACCGGCGGTCGGGGGTTCGAGC
CCTCCCACTCCTGCCA
Downstream region at tRNA end position 
gtgatatgcg
Secondary structure (Cloverleaf model)
>SRA1010219	Trp	CCA
                   t      GCCA gtgatatgcg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          C G
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     CGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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