The detailed information of tRNA gene sequence


Sequence ID>SRA1010220
Genome IDSRR020491.493012
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 183
End posion on genome 110
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgccgttta
tRNA gene sequence 
GGGCCCATAGCTCAACGGTTAGAGCAGCAGACTCATAATCTGTTGGTTCGGGGTTCGAAT
CCCTGTGGGCCCACgt
Downstream region at tRNA end position 
caaattcccc
Secondary structure (Cloverleaf model)
>SRA1010220	Met	CAT
                   a      ACgt caaattcccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G T C C C     A
      C A A        A      | + | | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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