The detailed information of tRNA gene sequence


Sequence ID>SRA1010223
Genome IDSRR020491.495127
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 105
End posion on genome 31
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtataatat
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGTGGAATCATAATCCACGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACtg
Downstream region at tRNA end position 
tcaagttacc
Secondary structure (Cloverleaf model)
>SRA1010223	Met	CAT
                   t      ACtg tcaagttacc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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