The detailed information of tRNA gene sequence


Sequence ID>SRA1010240
Genome IDSRR020491.500430
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 289
End posion on genome 203
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nntttttttG
tRNA gene sequence 
GTGGGGGTGGCAGAGCGGCTTAATGCGGCGGTCTTGAAAACCGTTGACCTGCGAGGGTCC
GGGGGTTCGAATCCCTCCCCCTCCGCgt
Downstream region at tRNA end position 
tattaatatt
Secondary structure (Cloverleaf model)
>SRA1010240	Ser	TGA
                   G      GCgt tattaatatt
                     G - C
                     T   C
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      T T A        G     TGACCTGCGAGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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