The detailed information of tRNA gene sequence


Sequence ID>SRA1010252
Genome IDSRR020491.503824
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 100
End posion on genome 177
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agtcaagcgc
tRNA gene sequence 
GGCCCGGTGGTGTAGCTGGTTTAACACACCGCCCTGTCAAGGCGGAGATCGGCGGTTCGA
ATCCGCTCCGGGTCGCCA
Downstream region at tRNA end position 
aacgcacatg
Secondary structure (Cloverleaf model)
>SRA1010252	Asp	GTC
                   c      GCCA aacgcacatg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C G C C     A
    T C G A        G      + | | | |     G
  G         T G T G       G G C G G     C
  G         | | | |                 T T
  T         A C A C
    T T A          A     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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