The detailed information of tRNA gene sequence


Sequence ID>SRA1010257
Genome IDSRR020491.504380
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 12
End posion on genome 86
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttttactgc
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGTAGTGCGTAGGCCTGCAAAGCCTGATGTCGAGAGTTCAAA
TCTCTCCCTCACCTCtt
Downstream region at tRNA end position 
tgatcttggt
Secondary structure (Cloverleaf model)
>SRA1010257	Cys	GCA
                   c      TCtt tgatcttggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G T A        G     ATGTC
                    T + G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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