The detailed information of tRNA gene sequence


Sequence ID>SRA1010258
Genome IDSRR020491.504649
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggtgacatca
tRNA gene sequence 
GGGCGATTGGTGTAGTCTGGATATCATGCTGGCCTTCTAAGCCGGTGACACGGGTTCGAA
TCCTGTATCGCCTACCA
Downstream region at tRNA end position 
ttcctcgcgg
Secondary structure (Cloverleaf model)
>SRA1010258	Arg	TCT
                   a      ACCA ttcctcgcgg
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C C     A
    C T G A        G      | | + | |     G
  T         T G T G       A C G G G     C
  G           | | +                 T T
  G         T C A T
    A T A          G     TGAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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