The detailed information of tRNA gene sequence


Sequence ID>SRA1010260
Genome IDSRR020491.504976
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 178
End posion on genome 105
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggttttattt
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCCTGAATGGCATTCAGGAGGTCGTCGGTTCAATC
CCGTCTGGCTCCACtg
Downstream region at tRNA end position 
atttgaataa
Secondary structure (Cloverleaf model)
>SRA1010260	Ala	GGC
                   t      ACtg atttgaataa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C T G C C     A
      T G A        A      |   | | |     A
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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