The detailed information of tRNA gene sequence


Sequence ID>SRA1010292
Genome IDSRR020491.518265
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 251
End posion on genome 176
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnttttt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGTCTGGTTTGCATCCAGGAGGTCGTCGGTTCGATC
CCGACTGGCTCCACCA
Downstream region at tRNA end position 
aatttaacag
Secondary structure (Cloverleaf model)
>SRA1010292	Ala	TGC
                   t      ACCA aatttaacag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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