The detailed information of tRNA gene sequence


Sequence ID>SRA1010315
Genome IDSRR020492.7463
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 129
End posion on genome 203
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgtgcgagta
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTTAGAGTGCCGGTCTGTCACACCGGAGGTCGCGAGTTCGAG
TCTCGTCAGCCCCGCtg
Downstream region at tRNA end position 
aagctgattg
Secondary structure (Cloverleaf model)
>SRA1010315	Asp	GTC
                   a      GCtg aagctgattg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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