The detailed information of tRNA gene sequence


Sequence ID>SRA1010323
Genome IDSRR020492.11629
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 236
End posion on genome 160
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aacaaaattT
tRNA gene sequence 
GGATCCGTCGTCTAGCTTGGTTTGGATATCGCACTCACACTGCGGGGGTCAAGGGTTCAA
ATCCCTTCGGATCCATat
Downstream region at tRNA end position 
tgttattcat
Secondary structure (Cloverleaf model)
>SRA1010323	Val	CAC
                   T      ATat tgttattcat
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       A A G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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