The detailed information of tRNA gene sequence


Sequence ID>SRA1010330
Genome IDSRR020492.14150
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 58
End posion on genome 133
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attattgagt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGGTGGTCTCCAAAACCACAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gcttaagcta
Secondary structure (Cloverleaf model)
>SRA1010330	Trp	CCA
                   t      GCCA gcttaagcta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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