The detailed information of tRNA gene sequence


Sequence ID>SRA1010333
Genome IDSRR020492.16389
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 47
End posion on genome 123
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagactgat
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTTAGAGCGTTGGACTCATAAGCCAAAGGTCGCTGGTTCGAC
TCCAGCTCCCGCTACCA
Downstream region at tRNA end position 
attattacaa
Secondary structure (Cloverleaf model)
>SRA1010333	Met	CAT
                   t      ACCA attattacaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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