The detailed information of tRNA gene sequence


Sequence ID>SRA1010348
Genome IDSRR020492.24032
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 104
End posion on genome 28
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cccaccattc
tRNA gene sequence 
GGGGGTGTAGCTCAATTGGTTAGAGCGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAG
TCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
tattattcgc
Secondary structure (Cloverleaf model)
>SRA1010348	Asp	GTC
                   c      GCCA tattattcgc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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