The detailed information of tRNA gene sequence


Sequence ID>SRA1010369
Genome IDSRR020492.30422
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 246
End posion on genome 169
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctgaccctt
tRNA gene sequence 
GGCTATGTAGCTCAGCTGGTTTAGAGCGCAGCATTCATAATGCTGAGGTCGATGGTTCAA
GTCCATCCATAGCCACCA
Downstream region at tRNA end position 
cctccctgcc
Secondary structure (Cloverleaf model)
>SRA1010369	Met	CAT
                   t      ACCA cctccctgcc
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     C T A C C     A
    T C G A        A      | | | | |     A
  G         C T C G       G A T G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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