The detailed information of tRNA gene sequence


Sequence ID>SRA1010371
Genome IDSRR020492.31540
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 171
End posion on genome 246
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aatacaaaat
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCTTCAATGGCATTGAAGAGGTCAGGAGTTCGAGC
CTCCTCAGCTCCACCA
Downstream region at tRNA end position 
aataaaaagg
Secondary structure (Cloverleaf model)
>SRA1010371	Ala	GGC
                   t      ACCA aataaaaagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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