The detailed information of tRNA gene sequence


Sequence ID>SRA1010373
Genome IDSRR020492.32061
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 147
End posion on genome 73
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagaaaaacc
tRNA gene sequence 
GGATCCGTCGTCTAGCTTGGTTTGGATACCGCACTCACACTGCGGGGGTCAAGGGTTCAA
ATCCCTTCGGATCCAtgt
Downstream region at tRNA end position 
gattactcta
Secondary structure (Cloverleaf model)
>SRA1010373	Val	CAC
                   c      Atgt gattactcta
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       A A G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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