The detailed information of tRNA gene sequence


Sequence ID>SRA1010383
Genome IDSRR020492.34911
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 267
End posion on genome 190
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnagcag
tRNA gene sequence 
GCACCGGTGCCCGAGCGGACCAAGGGAACGGCCTGCAAAGCCGTAAAGCCGCGGGTTCAA
ATCCCGCCCGGTGCTCGA
Downstream region at tRNA end position 
cggaccgcgt
Secondary structure (Cloverleaf model)
>SRA1010383	Cys	GCA
                   g      TCGA cggaccgcgt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    A       A G G G
      C C A        A     AAAGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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