The detailed information of tRNA gene sequence


Sequence ID>SRA1010384
Genome IDSRR020492.35014
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 251
End posion on genome 175
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnnnnngaa
tRNA gene sequence 
GCCCTCGTGGCTCAACTGGATAGAGCACTGGGTTTCGACCCCAGCGGCTACAGGTTCGAA
TCCTGTCGAGGGTACAA
Downstream region at tRNA end position 
ctaacctcaa
Secondary structure (Cloverleaf model)
>SRA1010384	Arg	TCG
                   a      ACAA ctaacctcaa
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C A A        G      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGCT
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  T       C
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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