The detailed information of tRNA gene sequence


Sequence ID>SRA1010387
Genome IDSRR020492.35175
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 44
End posion on genome 120
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atttttacat
tRNA gene sequence 
GGGCTTTTAGCTCAGATGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCCCTGGTTCAAT
TCCAGGAAGGCCCACCA
Downstream region at tRNA end position 
ttttaattaa
Secondary structure (Cloverleaf model)
>SRA1010387	Ile	GAT
                   t      ACCA ttttaattaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     T - A          T T
                    T     G G A C C     A
      A G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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