The detailed information of tRNA gene sequence


Sequence ID>SRA1010389
Genome IDSRR020492.35611
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 240
End posion on genome 166
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttctactac
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGCAGTGCGTGGGCCTGCAAAGCCCGAAGTCGAGAGTTCAAA
TCTCTCCCTCACCTCtc
Downstream region at tRNA end position 
tgatctttca
Secondary structure (Cloverleaf model)
>SRA1010389	Cys	GCA
                   c      TCtc tgatctttca
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G C A        G     AAGTC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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