The detailed information of tRNA gene sequence


Sequence ID>SRA1010392
Genome IDSRR020492.37557
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 55
End posion on genome 143
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaacatattT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCACGCTTGGAAAGTGTGTGTGCTGTCAAAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGTga
Downstream region at tRNA end position 
taaagtatta
Secondary structure (Cloverleaf model)
>SRA1010392	Ser	GGA
                   T      GTga taaagtatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGTGCTGTCAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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