The detailed information of tRNA gene sequence


Sequence ID>SRA1010395
Genome IDSRR020492.40388
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 109
End posion on genome 34
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aattggattt
tRNA gene sequence 
AGGTGAGTAGTTCAATTGGTAGAGCACCGGCCTCCAAAGCCGGGAGTTGAGGGTTCGAGT
CCTTCCTCACCTGCAA
Downstream region at tRNA end position 
gagcggtgca
Secondary structure (Cloverleaf model)
>SRA1010395	Trp	CCA
                   t      GCAA gagcggtgca
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T T G       G A G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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