The detailed information of tRNA gene sequence


Sequence ID>SRA1010401
Genome IDSRR020492.43954
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 256
End posion on genome 184
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnnnnnaca
tRNA gene sequence 
GCGGTAGTAGCTCAATCGGATAGAGCATCTGGCTTCGGACCAGAGGGTTGGGGTTCGAGT
CCTCTCTACCGCAata
Downstream region at tRNA end position 
cagtttggag
Secondary structure (Cloverleaf model)
>SRA1010401	Arg	TCG
                   a      Aata cagtttggag
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T G
                    T     T C T C C     A
      T A A        A        | + | |     G
    C       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGT
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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