The detailed information of tRNA gene sequence


Sequence ID>SRA1010405
Genome IDSRR020492.44348
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 167
End posion on genome 95
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccaatattgc
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGCCAGCGGTTCGATC
CCGCTATCCTCCAacc
Downstream region at tRNA end position 
taaaatttag
Secondary structure (Cloverleaf model)
>SRA1010405	Ala	TGC
                   c      Aacc taaaatttag
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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