The detailed information of tRNA gene sequence


Sequence ID>SRA1010411
Genome IDSRR020492.47656
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 82
End posion on genome 157
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agtttttatt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGCAGTTCGATC
CTGCTTAGCTCCACCA
Downstream region at tRNA end position 
ttttctctga
Secondary structure (Cloverleaf model)
>SRA1010411	Ala	TGC
                   t      ACCA ttttctctga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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