The detailed information of tRNA gene sequence


Sequence ID>SRA1010416
Genome IDSRR020492.49930
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 118
End posion on genome 192
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gggaatcttT
tRNA gene sequence 
AGGTCCGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGGGGGTTCGAGT
CCCTCCGGGCCTGTat
Downstream region at tRNA end position 
gaagaacggc
Secondary structure (Cloverleaf model)
>SRA1010416	Trp	CCA
                   T      GTat gaagaacggc
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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