The detailed information of tRNA gene sequence


Sequence ID>SRA1010424
Genome IDSRR020492.52086
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 110
End posion on genome 17
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
agagaaccga
tRNA gene sequence
GGAGAGGTGGCCGAGTCCGGTTGAAGGCGCTCCCCTGCTAAGGGAGTAAGGGCCCAAAAG
CTCTTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position
ttgtttcgag
Secondary structure (Cloverleaf model)
>SRA1010424	Ser	GCT
                   a      GCCA ttgtttcgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     A
  C         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAAGGGCCCAAAAGCTCTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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